Papers and Relevant Publications

The Human Ageing Genomic Resources and its associated resources have been featured in several publications, including official descriptions and analyses by HAGR's authors, and numerous publications by other researchers.

Official descriptions of HAGR

The official, up-to-date paper describing the Human Ageing Genomic Resources is:

Tacutu, R., et al. (2018) "Human Ageing Genomic Resources: new and updated databases." Nucleic Acids Research 46(D1):D1083-D1090.

We ask that authors using our resources cite the above description of HAGR as it not only details numerous recent updates and enhancements but also as a way to credit new contributors not included in our previous description of HAGR. Previous, outdated descriptions of HAGR and its resources were:

de Magalhaes, J. P., et al. (2005) "HAGR: the Human Ageing Genomic Resources." Nucleic Acids Res 33(Database Issue):D537-D543.

de Magalhaes, J. P., et al. (2009) "The Human Ageing Genomic Resources: online databases and tools for biogerontologists." Aging Cell 8(1):65-72.

de Magalhaes, J. P., and Costa, J. (2009) "A database of vertebrate longevity records and their relation to other life-history traits." Journal of Evolutionary Biology 22(8):1770-1774.

Tacutu, R., et al. (2013) "Human Ageing Genomic Resources: Integrated databases and tools for the biology and genetics of ageing." Nucleic Acids Research 41(D1):D1027-D1033.

Authors employing only particular HAGR databases or datasets are asked to cite specific papers, as detailed elsewhere. Please also refer to the various analyses we have already performed.

Major analyses of HAGR databases by its authors

We have conducted a number of broad, large-scale analyses using HAGR databases. Firstly, we obtained a visualization and interpretation of the genomic and proteomic network of ageing using GenAge:

de Magalhaes, J. P., and Toussaint, O. (2004) "GenAge: a genomic and proteomic network map of human ageing." FEBS Lett 571(1-3):243-247.

More recently, we did a systematic analysis - including network analyses, machine learning and evolutionary analyses - of genes associated with ageing using GenAge:

Fernandes, M., et al. (2016) "Systematic analysis of the gerontome reveals links between aging and age-related diseases." Human Molecular Genetics 25(21):4804-4818.

We performed an analysis of the gene network of dietary restriction using GenDR:

Wuttke, D., et al. (2012) "Dissecting the gene network of dietary restriction to identify evolutionarily conserved pathways and new functional genes." PLoS Genetics 8(8):e1002834.

Our molecular signatures of ageing were derived from a meta-analysis of ageing microarray data:

de Magalhaes, J. P., et al. (2009) "Meta-analysis of age-related gene expression profiles identifies common signatures of aging." Bioinformatics 25(7):875-881.

Likewise, the molecular signatures of DR were derived from a meta-analysis:

Plank, M., et al. (2012) "A meta-analysis of caloric restriction gene expression profiles to infer common signatures and regulatory mechanisms." Molecular BioSystems 8(4):1339-1349.

Our systems biology analysis of cell senescence using CellAge:

Avelar, R., et al. (2020) "A multidimensional systems biology analysis of cellular senescence in ageing and disease." Genome Biology 21(1):91.

Our initial description of DrugAge included an analysis of the targets of lifespan-extending drugs:

Barardo, D., et al. (2017) "The DrugAge database of ageing-related drugs." 16:594-597. Aging Cell 16(3):594-597.

Finally, we took advantage of the AnAge dataset to evaluate the relationship between metabolic rates, growth rates, developmental timing, and longevity:

de Magalhaes, J. P., et al. (2007) "An analysis of the relationship between metabolism, developmental schedules, and longevity using phylogenetic independent contrasts." J Gerontol A Biol Sci Med Sci 62(2):149-160.

Highlights in scientific journals

The Human Ageing Genomic Resources have been highlighted in:

Other academic publications using and/or citing HAGR

If you cite HAGR or any of its resources in an academic publication and wish for it to be mentioned in this page please let us know.

Chung, H.Y., et al. (2004) "Molecular inflammation hypothesis of aging." Kor J Gerontol 14(1):12-19.

de Magalhaes, J.P. (2005) "Open-minded scepticism: inferring the causal mechanisms of human ageing from genetic perturbations." Ageing Res Rev 4(1):1-22.

Morris, B.J. (2005) "A forkhead in the road to longevity: the molecular basis of lifespan becomes clearer." J Hypertens 23(7):1285-1309.

Raghothama, C., et al. (2005) "Bioinformatics and proteomics approaches for aging research." Biogerontology 6(4):227-232.

Karasik, D., et al. (2005) "Disentangling the genetic determinants of human aging: biological age as an alternative to the use of survival measures." J Gerontol A Biol Sci Med Sci 60(5):574-587.

de Magalhaes, J.P. (2005) "Human disease-associated mitochondrial mutations fixed in nonhuman primates." J Mol Evol 61(4):491-497.

Galvin, J.E., and Ginsberg, S. D. (2005) "Expression profiling in the aging brain: a perspective." Ageing Res Rev 4(4):529-547.

Fried, L.P., et al. (2005) "From bedside to bench: research agenda for frailty." Sci Aging Knowledge Environ 2005(31):pe24.

Blalock, E.M., et al. (2005) "Harnessing the power of gene microarrays for the study of brain aging and Alzheimer's disease: statistical reliability and functional correlation." Ageing Res Rev 4(4):481-512.

Ruggiero, C., and Ferrucci, L. (2006) "The endeavor of high maintenance homeostasis: resting metabolic rate and the legacy of longevity." J Gerontol A Biol Sci Med Sci 61(5):466-471.

Rottenberg, H. (2006) "Longevity and the evolution of the mitochondrial DNA-coded proteins in mammals." Mech Ageing Dev 127(9):748-760.

Lehmann, G. et al. (2006) "Mitochondrial genome anatomy and species-specific lifespan." Rejuvenation Res 9(2):223-226.

Khaidakov, M., et al. (2006) "Direct repeats in mitochondrial DNA and mammalian lifespan." Mech Ageing Dev 127(10):808-812.

Kriete, A., et al. (2006) "Systems approaches to the networks of aging." Ageing Res Rev 5(4):434-448.

Swynghedauw, B., et al. (2006) "Biology of cardiac and vascular senescence." Bull Acad Natl Med 190(4-5):783-792.

Murakami, S. (2006) "Stress resistance in long-lived mouse models." Exp Gerontol 41(10):1014-1019.

Harper, J.M., et al. (2007) "Skin-derived fibroblasts from long-lived species are resistant to some, but not all, lethal stresses and to the mitochondrial inhibitor rotenone." Aging Cell 6(1):1-13.

Seluanov, A., et al. (2007) "Telomerase activity coevolves with body mass not lifespan." Aging Cell 6(1):45–52.

Rottenberg, H. (2007) "Coevolution of exceptional longevity, exceptionally high metabolic rates, and mitochondrial DNA-coded proteins in mammals." Exp Gerontol 42(4):364-373.

Rottenberg, H. (2007) "Exceptional longevity in songbirds is associated with high rates of evolution of cytochrome b, suggesting selection for reduced generation of free radicals." J Exp Biol 210(12):2170-2180.

Martin, G.M., et al. (2007) "Genetic determinants of human health span and life span: progress and new opportunities." PLoS Genet 3(7):e125.

Kahn, A.J. (2007) "Epigenetic and mitochondrial mechanisms in aging and longevity: a report of a meeting of the Longevity Consortium, Napa, California, October 25-27, 2006." J Gerontol A Biol Sci Med Sci 62(6):577-582.

Lambert, A.J., et al. (2007) "Low rates of hydrogen peroxide production by isolated heart mitochondria associate with long maximum lifespan in vertebrate homeotherms." Aging Cell 6(5):607-618.

Lunetta, K.L., et al. (2007) "Genetic correlates of longevity and selected age-related phenotypes: a genome-wide association study in the Framingham Study." BMC Med Genet 6(Suppl 1):S13.

Huhne, R., et al. (2007) "A comparative view at comprehensive information resources on three-dimensional structures of biological macro-molecules." Brief Funct Genomic Proteomic 6(3):220-239.

Xue, H., et al. (2007) "A modular network model of aging." Mol Syst Biol 3:147.

Pletcher, S.D., et al. (2007) "Chemical complexity and the genetics of aging." Annu Rev Ecol Evol Syst 38:299-326.

Moosmann, B., and Behl, C. (2008) "Mitochondrially encoded cysteine predicts animal lifespan." Aging Cell 7(1):32-46.

Nabholz, B., et al. (2008) "Determination of mitochondrial genetic diversity in mammals." Genetics 178(1):351-361.

Nabholz, B., et al. (2008) "Strong variations of mitochondrial mutation rate across mammals--the longevity hypothesis." Mol Biol Evol 25(1):120-130.

Georgopoulo, P. G. (2008) "A multiscale approach for assessing the interactions of environmental and biological systems in a holistic health risk assessment framework." Water Air Soil Pollut Focus 8(1):3-21.

Sebastiani, P., et al. (2008) "A hierarchical and modular approach to the discovery of robust associations in genome-wide association studies from pooled DNA samples." BMC Med Genet 9:6.

Chen, D.P., et al. (2008) "Novel integration of hospital electronic medical records and gene expression measurements to identify genetic markers of maturation." Pac Symp Biocomput 243-254.

Buffenstein, R. (2008) "Negligible senescence in the longest living rodent, the naked mole-rat: insights from a successfully aging species." J Comp Physiol [B] 178(4):439-445.

Welch, J.J., et al. (2008) "Correlates of substitution rate variation in mammalian protein-coding sequences." BMC Evol Biol 8:53.

Kleine, L.L., et al. (2008) "Role of bacterial peptidase F inferred by statistical analysis and further experimental validation." HFSP J 2(1):29-41.

Jorge, M.L.S.P. (2008) "Effects of forest fragmentation on two sister genera of Amazonian rodents (Myoprocta acouchy and Dasyprocta leporina)." Biol Conserv 141(3):617-623.

da Fonseca, R.R., et al. (2008) "The adaptive evolution of the mammalian mitochondrial genome." BMC Genomics 9:119.

Asher, R.J., and Lehmann, T. (2008) "Dental eruption in afrotherian mammals." BMC Genomics 6:14.

Lehmann, G., et al. (2008) "Do mitochondrial DNA and metabolic rate complement each other in determination of the mammalian maximum longevity?" Rejuvenation Res 11(2):409-417.

Gielchinsky, Y., et al. (2008) "Gene expression in women conceiving spontaneously over the age of 45 years." Fertil Steril 89(6):1641-1650.

Pang, C.Y., et al. (2008) "MtDNA mutations, functional decline and turnover of mitochondria in aging." Front Biosci 13(6):3661-3675.

Han, L., et al. (2008) "CpG island density and its correlations with genomic features in mammalian genomes." Genome Biol 9(5):R79.

Hardman, M.J., and Ashcroft, G. S. (2008) "Estrogen, not intrinsic aging, is the major regulator of delayed human wound healing in the elderly." Genome Biol 9(5):R80.

de Magalhaes, J.P., and Faragher, R. G. (2008) "Cell divisions and mammalian aging: integrative biology insights from genes that regulate longevity." Bioessays 30(6):567-578.

Furness, L.J., and Speakman, J. R. (2008) "Energetics and longevity in birds." AGE 30(2-3):75-87.

Buffenstein, R., et al. (2008) "The oxidative stress theory of aging: embattled or invincible? Insights from non-traditional model organisms." AGE 30(2-3):99-109.

Seluanov, A., et al. (2008) "Distinct tumor suppressor mechanisms evolve in rodent species that differ in size and lifespan." Aging Cell 7(6):813-823.

Min, X.J., and Hickey, D. A. (2008) "An evolutionary footprint of age-related natural selection in mitochondrial DNA." J Mol Evol 67(4):412-417.

Lehmann, G., et al. (2008) "Mitochondrial determinants of mammalian longevity." Probl Aging Longevity (Kiev) 17:211-229.

Kitazoe, Y., et al. (2008) "Adaptive threonine increase in transmembrane regions of mitochondrial proteins in higher primates." PLoS ONE 3(10):e3343.

Managbanag, J. R., et al. (2008) "Shortest-path network analysis is a useful approach toward identifying genetic determinants of longevity." PLoS ONE 3(11):e3802.

Mumby, H., and Vinicius, L. (2008) "Primate growth in the slow lane: a study of inter-species variation in the growth constant A." Evol Biol 35(4):287-295.

Robb, E.L., et al. (2009) "Mitochondria, cellular stress resistance, somatic cell depletion and lifespan." Curr Aging Sci 2(1):12-27.

Gorbunova, V., and Seluanov, A. (2009) "Coevolution of telomerase activity and body mass in mammals: from mice to beavers." Mech Ageing Dev 130(1-2):3-9.

Budovsky, A., et al. (2009) "Common gene signature of cancer and longevity." Mech Ageing Dev 130(1-2):33-39.

Rattan, S.I., and Singh, R. (2009) "Progress & prospects: gene therapy in aging." Gene Ther 16(1):3-9.

Austad, S.N. (2009) "Comparative biology of aging." J Gerontol A Biol Sci Med Sci 64(2):199-201.

Buffenstein, R., and Pinto, M. (2009) "Endocrine function in naturally long-living small mammals." Mol Cell Endocrinol 299(1):101-111.

Wolfson, M., et al. (2009) "The signaling hubs at the crossroad of longevity and age-related disease networks." Int J Biochem Cell Biol 41(3):516-520.

Altar, C.A. et al. (2009) "Target identification for CNS diseases by transcriptional profiling." Neuropsychopharmacology 34(1):18-54.

Bonatto, C.C. et al. (2009) "Shape and size of red blood cells from the Pygoscelid penguins of Antarctica using atomic force microscopy." Polar Biol 32(2):287-293.

Nabholz, B. et al. (2009) "The erratic mitochondrial clock: variations of mutation rate, not population size, affect mtDNA diversity across birds and mammals." BMC Evol Biol 9:54.

Galtier, N. et al. (2009) "Inverse relationship between longevity and evolutionary rate of mitochondrial proteins in mammals and birds." Mitochondrion 9(1):51-57.

Bostock, C.V. et al. (2009) "Genetic determinants of ageing processes and diseases in later life." Maturitas 62(3):225-229.

Lynch, H.J., and Fagan, W.F. (2009) "Survivorship curves and their impact on the estimation of maximum population growth rates." Ecology 90(4):1116-1124.

Asher, R.J., and Olbricht, G. (2009) "Dental ontogeny in Macroscelides proboscideus (Afrotheria) and Erinaceus europaeus (Lipotyphla)." J Mamm Evol 16(2):99-115.

Estep, P.W. et al. (2009) "Short-term calorie restriction in male mice feminizes gene expression and alters key regulators of conserved aging regulatory pathways." PLoS One 4(4):e5242.

Somel, M. et al. (2009) "Transcriptional neoteny in the human brain." Proc Natl Acad Sci U S A 106(14):5743-5748.

Demetrius, L. et al. (2009) "Evolutionary entropy: a predictor of body size, metabolic rate and maximal life span." Bull Math Biol 71(4):800-818.

Emamian, E.S. et al. (2009) "Peripheral blood gene expression profiling in Sjögren's syndrome." Genes Immun 10(4):285-296.

Rosenstiel, P. et al. (2009) "Evolution and function of innate immune receptors - insights from marine invertebrates." J Innate Immun 1(4):291-300.

Karol, M.H. (2009) "How environmental agents influence the aging process." Biomolecules & Therapeutics 17(2):113-124.

Forero-Medina, G. et al. (2009) "Body size and extinction risk in Brazilian carnivores." Biota Neotrop 9(2).

Halaschek-Wiener, J. et al. (2009) "Genetic variation in healthy oldest-old." PLoS One 4(8):e6641.

Zhang, T. et al. (2009) "The effect of osteoprotegerin gene modification on wear debris-induced osteolysis in a murine model of knee prosthesis failure." Biomaterials 30(30):6102-6108.

Zetterberg, H. et al. (2009) "The szilard hypothesis on the nature of aging revisited." Genetics 182(1):3-9.

Gillis, J., and Pavlidis, P. (2009) "A methodology for the analysis of differential coexpression across the human lifespan." BMC Bioinformatics 10:306.

Wang, J. et al. (2009) "Disease-aging network reveals significant roles of aging genes in connecting genetic diseases." PLoS Comput Biol 5(9):e1000521.

Simko, G.I. et al. (2009) "Network strategies to understand the aging process and help age-related drug design." Genome Med 1(9):90.

Lescai, F. et al. (2009) "Human longevity and 11p15.5: a study in 1321 centenarians." Eur J Hum Genet 17(11):1515-1519.

Faragher, R.G. et al. (2009) "Can we intervene in human ageing?" Expert Rev Mol Med 11:e27.

Sedivy, J.M. (2009) "How to learn new and interesting things from model systems based on "exotic" biological species." Proc Natl Acad Sci U S A 106(46):19207-19208.

Seluanov, A. et al. (2009) "Hypersensitivity to contact inhibition provides a clue to cancer resistance of naked mole-rat." Proc Natl Acad Sci U S A 106(46):19352-19357.

Argmann, C. et al. (2009) "Ppargamma2 is a key driver of longevity in the mouse." PLoS Genet 5(12):e1000752.

Kohler, M., and Moya-Sola, S. (2009) "Physiological and life history strategies of a fossil large mammal in a resource-limited environment." Proc Natl Acad Sci U S A 106(48):20354-20358.

Munshi-South, J., and Wilkinson, G.S. (2010) "Bats and birds: Exceptional longevity despite high metabolic rates." Ageing Res Rev 9(1):12-19.

Philipp, E.E., and Abele D. (2010) "Masters of longevity: lessons from long-lived bivalves--a mini-review." Gerontology 56(1):55-65.

Marques, F.Z. et al. (2010) "The molecular basis of longevity, and clinical implications." Maturitas 65(2):87-91.

Tristan, T. (2010) "The aging raptor." Vet Clin North Am Exot Anim Pract 13(1):51-84.

Fagan, W.F. et al. (2010) "Pitfalls and challenges of estimating population growth rate from empirical data: consequences for allometric scaling relations." Oikos 119(3):455-464.

Page, M.M. et al. (2010) "Antioxidant enzyme activities are not broadly correlated with longevity in 14 vertebrate endotherm species." Age (Dordr) 32(2):255-270.

Kribs-Zaleta, C. et al. (2010) "Estimating contact process saturation in sylvatic transmission of Trypanosoma cruzi in the United States." PLoS Negl Trop Dis 4(4):e656.

Jobson, R.W. et al. (2010) "An evolutionary genome scan for longevity-related natural selection in mammals." Mol Biol Evol 27(4):840-847.

Lambert, A.J.. et al. (2010) "Low complex I content explains the low hydrogen peroxide production rate of heart mitochondria from the long-lived pigeon, Columba livia." Aging Cell 9(1):78-91.

Hackl, M. et al. (2010) "miR-17, miR-19b, miR-20a, and miR-106a are down-regulated in human aging." Aging Cell 9(2):291-296.

Fortney, K. et al. (2010) "Inferring the functions of longevity genes with modular subnetwork biomarkers of Caenorhabditis elegans aging." Genome Biol 11(2):R13.

González-Lagos, C. et al. (2010) "Large-brained mammals live longer." J Evol Biol 23(5):1064-1074.

Cevenini, E. et al. (2010) "Systems biology and longevity: an emerging approach to identify innovative anti-aging targets and strategies." Curr Pharm Des 16(7):802-813.

Tacutu, R. et al. (2010) "MicroRNA-regulated protein-protein interaction networks: how could they help in searching for pro-longevity targets?" Rejuvenation Res 13(2-3):373-377.

Muradian, K.K. et al. (2010) "NUMT ("new mighty") hypothesis of longevity." Rejuvenation Res 13(2-3):152-155.

Ricklefs, R.E. (2010) "Life-history connections to rates of aging in terrestrial vertebrates." Proc Natl Acad Sci U S A 107(22):10314-10319.

Robert, L. et al. (2010) "Genetic, epigenetic and posttranslational mechanisms of aging." Biogerontology 11(4):387-399.

Tacutu, R. et al. (2010) "The NetAge database: a compendium of networks for longevity, age-related diseases and associated processes." Biogerontology 11(4):513-522.

Chautard, E. et al. (2010) "Interaction networks as a tool to investigate the mechanisms of aging." Biogerontology 11(4):463-473.

Warnefors, M. et al. (2010) "Transposable elements: insertion pattern and impact on gene expression evolution in hominids." Mol Biol Evol 27(8):1955-1962.

Wyse, C.A. et al. (2010) "Association between mammalian lifespan and circadian free-running period: the circadian resonance hypothesis revisited." Biol Lett 6(5):696-698.

Seligmann, H. (2010) "Avoidance of antisense, antiterminator tRNA anticodons in vertebrate mitochondria." Biosystems 101(1):42-50.

Romiguier, J. et al. (2010) "Contrasting GC-content dynamics across 33 mammalian genomes: relationship with life-history traits and chromosome sizes." Genome Res 2020(8):1001-1009.

Speakman, J.R., and Król, E. (2010) "The heat dissipation limit theory and evolution of life histories in endotherms - time to dispose of the disposable soma theory?" Integr Comp Biol 50(5):793-807.

Kipper, S., and Kiefer, S. (2010) "Age related changes in birds' singing styles: on fresh tunes and fading voices?" Adv Study Behav 4177—118.

Vogt, G. (2010) "Suitability of the clonal marbled crayfish for biogerontological research: a review and perspective, with remarks on some further crustaceans." Biogerontology 11(6):643-669.

Houtkooper, R.H. et al. (2010) "Metabolic networks of longevity." Cell 142(1):9-14.

Somel, M. et al. (2010) "MicroRNA, mRNA, and protein expression link development and aging in human and macaque brain." Genome Res 20(9):1207-1218.

Seligmann, H. (2010) "Undetected antisense tRNAs in mitochondrial genomes?" Biol Direct 5:39.

Fang, L.Q. et al. (2010) "Spatiotemporal trends and climatic factors of hemorrhagic fever with renal syndrome epidemic in Shandong Province, China." PLoS Negl Trop Dis 4(8):e789.

Chung, W.H. et al. (2010) "The role of genetic variants in human longevity." Ageing Res Rev 9(Suppl 1):S67-S78.

Cornwallis, C.K. et al. (2010) "Promiscuity and the evolutionary transition to complex societies." Nature 466(7309):969-972.

Jobson, R.W. et al. (2010) "Apparent longevity-related adaptation of mitochondrial amino acid content is due to nucleotide compositional shifts." Mitochondrion 10(5):540-547.

Weisbecker, V., and Goswami, A. (2010) "Brain size, life history, and metabolism at the marsupial/placental dichotomy." Proc Natl Acad Sci U S A 107(37):16216-16221.

Köhler, M., and Moyà-Solà, S. (2010) "Reply to Meiri and Raia: Small offspring size and fast life history all the way?" Proc Natl Acad Sci U S A 107(8):E28.

Stuart, J.A., and Page, M.M. (2010) "Plasma IGF-1 is negatively correlated with body mass in a comparison of 36 mammalian species." Mech Ageing Dev 131(9):591-598.

Neill, D. (2010) "A proposal in relation to a genetic control of lifespan in mammals." Ageing Res Rev 9(4):437-446.

Zhang, T. et al. (2010) "Correlation of life-history traits with the molecular diversity of bird nuclear coding elements." Evol. Ecol. Res. 12(8):987-994.

Fuellen, G. et al. (2010) "Bioinformatics in aging research: a workshop report." Rejuvenation Res 13(6):763-777.

Laschober, G.T. et al. (2010) "Identification of evolutionarily conserved genetic regulators of cellular aging." Aging Cell 9(6):1084-1097.

Kwon, J. et al. (2010) "Gerontome: a web-based database server for aging-related genes and analysis pipelines." BMC Genomics 11 Suppl 4S20.

Austad, S.N. (2010) "Cats, "rats," and bats: the comparative biology of aging in the 21st century." Integr Comp Biol 50(5):783-792.

Li, Y.H. et al. (2010) "Systematic analysis and prediction of longevity genes in Caenorhabditis elegans." Mech Ageing Dev 131(11-12):700-709.

Mustafina, O.E. et al. (2010) "[Polymorphism of cytokine genes and human longevity]." Adv Gerontol 23(3):339-345.

Lui, JC. et al. (2010) "Changes in gene expression associated with aging commonly originate during juvenile growth." Mech. Ageing Dev. 131(10):641-649.

Salway, K.D. et al. (2011) "Enhanced protein repair and recycling are not correlated with longevity in 15 vertebrate endotherm species." Age (Dordr) 33(1):33-47.

Voituron, Y. et al. (2011) "Extreme lifespan of the human fish (Proteus anguinus): a challenge for ageing mechanisms." Biol Lett 7(1):105-107.

Lartillot N., and Poujol, R. (2011) "A phylogenetic model for investigating correlated evolution of substitution rates and continuous phenotypic characters." Mol Biol Evol 28(1):729-744.

Napolioni, V. et al. (2011) "Haptoglobin (HP) polymorphisms and human longevity: A cross-sectional association study in a Central Italy population." Clin Chim Acta 412(7-8):574-577.

Ahmed, S.S. et al. (2011) "Systems biological approach on neurological disorders: a novel molecular connectivity to aging and psychiatric diseases." BMC Syst Biol 56.

Ridgway, I.D. et al. (2011) "Maximum shell size, growth rate, and maturation age correlate with longevity in bivalve molluscs." J Gerontol A Biol Sci Med Sci 66(2):183-190.

Kuchaiev, O. et al. (2011) "GraphCrunch 2: Software tool for network modeling, alignment and clustering." BMC Bioinformatics 1224.

Miller, R.A. et al. (2011) "Comparative cellular biogerontology: primer and prospectus." Ageing Res. Rev. 10(2):181-190.

Bloss, C.S. et al. (2011) "Contemporary human genetic strategies in aging research." Ageing Res. Rev. 10(2):191-200.

Budovsky, A. et al. (2011) "Linking cell polarity, aging and rejuvenation." Biogerontology 12(2):167-175.

Kriete, A. et al. (2011) "Computational systems biology of aging." Wiley Interdiscip Rev Syst Biol Med 3(4):414-428.

Globerson, A., and Reznick, A.Z. (2011) "Biogerontology research in Israel." Biogerontology 12(1):17-30.

Turbill, C. et al. (2011) "Hibernation is associated with increased survival and the evolution of slow life histories among mammals." Proc. Biol. Sci. 278(1723):3355-3363.

Peysselon, F., and Ricard-Blum, S. (2011) "Understanding the biology of aging with interaction networks." Maturitas 69(2):126-130.

Gomes, N.M. et al. (2011) "Comparative biology of mammalian telomeres: hypotheses on ancestral states and the roles of telomeres in longevity determination." Aging Cell 10(5):761-768.

Tacutu, R. et al. (2011) "Molecular links between cellular senescence, longevity and age-related diseases - a systems biology perspective." Aging (Albany NY) 3(12):1178-1191.

Austad, S.N., and Fischer, K.E. (2011) "The development of small primate models for aging research." ILAR J 52(1):78-88.

Fu, X. et al. (2011) "Rapid metabolic evolution in human prefrontal cortex." Proc. Natl. Acad. Sci. U.S.A. 108(15):6181-6186.

Funasaka, T. et al. (2011) "RNA export factor RAE1 contributes to NUP98-HOXA9-mediated leukemogenesis." Cell Cycle 10(9):1456-1467.

Yanai, H. et al. (2011) "Is rate of skin wound healing associated with aging or longevity phenotype?" Biogerontology 12(6):591-597.

LePendu, P. et al. (2011) "Enabling enrichment analysis with the Human Disease Ontology." J Biomed Inform 44 Suppl 1:S31-S38.

Kato, M. et al. (2011) "Age-associated changes in expression of small, noncoding RNAs, including microRNAs, in C. elegans." RNA 17(10):1804-1820.

Salway, K.D. et al. (2011) "Higher levels of heat shock proteins in longer-lived mammals and birds." Mech. Ageing Dev. 132(6-7):287-297.

Wilson, D.M. et al. (2011) ""No one dies of old age": implications for research, practice, and policy." J Palliat Care 27(2):148-156.

Montgomery, M.K. et al. (2011) "The long life of birds: the rat-pigeon comparison revisited." PLoS ONE 6(8):e24138.

Van Raamsdonk, J.M., and Hekimi, S. (2011) "FUdR causes a twofold increase in the lifespan of the mitochondrial mutant gas-1." Mech. Ageing Dev. 132(10):519-521.

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