LongevityMap variant group

Entry Details

Longevity Association
Non-significant
Population
Italian (Northern) and Japanese
Study Design
AGTR1 was sequenced in 173 Italian centenarians (99-106 y, mean 100.9 ± 1.7 y, 83% female) and 376 younger controls (49-78 y, mean 65.9 ± 9.1 y, 43 % females). The results were then verified in 589 Japanese cases (99-115 y, mean 104.5 ± 3 y, 84% femal) and 422 controls (69-72 y, mean 70.1 ± 0.9 y, 52 % female).
Conclusions
rs422858, rs275653 were significantly associated with extreme longevity (P = 0.004). Other SNPs were not associated with longevity.

Variants (8)

AGTR1

1.
Identifier
rs2307085
Cytogenetic Location
3q24
UCSC Genome Browser
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2.
Identifier
rs5182
Cytogenetic Location
3q24
UCSC Genome Browser
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3.
Identifier
rs12721225
Cytogenetic Location
3q24
UCSC Genome Browser
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4.
Identifier
rs5183
Cytogenetic Location
3q24
UCSC Genome Browser
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5.
Identifier
rs5186
Cytogenetic Location
3q24
UCSC Genome Browser
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6.
Identifier
rs5189
Cytogenetic Location
3q24
UCSC Genome Browser
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7.
Identifier
rs380400
Cytogenetic Location
3q24
UCSC Genome Browser
View 3q24 on the UCSC genome browser

Gene details

HGNC symbol
AGTR1
Aliases
AT1; AG2S; AT1B; AT1R; AT1AR; AT1BR; AT2R1; HAT1R; AGTR1B 
Common name
angiotensin II receptor type 1 
Description
Angiotensin II is a potent vasopressor hormone and a primary regulator of aldosterone secretion. It is an important effector controlling blood pressure and volume in the cardiovascular system. It acts through at least two types of receptors. This gene encodes the type 1 receptor which is thought to mediate the major cardiovascular effects of angiotensin II. This gene may play a role in the generation of reperfusion arrhythmias following restoration of blood flow to ischemic or infarcted myocardium. It was previously thought that a related gene, denoted as AGTR1B, existed; however, it is now believed that there is only one type 1 receptor gene in humans. Multiple alternatively spliced transcript variants have been reported for this gene. [provided by RefSeq, Jul 2012]
Other longevity studies of this gene
8
OMIM
106165
Ensembl
ENSG00000144891
UniProt/Swiss-Prot
A0A0A0MSE3_HUMAN
Entrez Gene
185
UniGene
477887
HapMap
View on HapMap

Homologs in model organisms

Danio rerio
agtr1b
Mus musculus
Agtr1a
Rattus norvegicus
Agtr1

In other databases

GenAge model organism genes
  • A homolog of this gene for Mus musculus is present as Agtr1a
GenAge human genes
  • This gene is present as AGTR1

WDR13

1.
Identifier
rs2272656
Cytogenetic Location
Xp11.23
UCSC Genome Browser
View Xp11.23 on the UCSC genome browser

Gene details

HGNC symbol
WDR13
Aliases
MG21 
Common name
WD repeat domain 13 
Description
This gene encodes a member of the WD repeat protein family. WD repeats are minimally conserved regions of approximately 40 amino acids typically bracketed by Gly-His and Trp-Asp (GH-WD), which may facilitate formation of heterotrimeric or multiprotein complexes. Members of this family are involved in a variety of cellular processes, including cell cycle progression, signal transduction, apoptosis, and gene regulation. A similar protein in mouse is thought to be a negative regulator of the pancreatic beta cell proliferation. Mice lacking this gene exhibit increased pancreatic islet mass and higher serum insulin levels, and are mildly obese. [provided by RefSeq, Nov 2016]
OMIM
300512
Ensembl
ENSG00000101940
UniProt/Swiss-Prot
WDR13_HUMAN
Entrez Gene
64743
UniGene
521973
HapMap
View on HapMap

Homologs in model organisms

Danio rerio
wdr13
Mus musculus
Wdr13
Rattus norvegicus
LOC308401

References

Benigni et al. (2013)

Other variants which are also part of this study